So here is where I mounted the motor in the car and mocked up the motor mounts. After all was setting right, I pulled it all out and haven't had the motor in since. Basically cleaning up all the dirty crap, fixing rust and replacing suspension is what has gone on in 6 months.
First I started with the motor on a cherry picker and a jack
I got it positioned exactly where I wanted it
Then with it in position I went ahead and began making the motor mounts. Pretty much went the Mad Dat style, but decided to go with factory S13 motor mounts
With the mounts in place I got the transmission in place and fabricated the transmission crossmember and retained the factory bolts. I will add some bracing, but the member is pretty stout
With the mounts set in the car and using a stumpy trans, the shifter comes up right through the factory auto trans hole dead center. And yes, I'm using the factory console for sure!
And this is what the car looks like from the bottom with the motor and transmission installed
And this is the result with the stock sway bar
Here's the motor in the engine bay mounted